Installation

TrajAtlas requires Python version >= 3.8 to run. We recommend using Mamba to manage Python environments. If you encounter any problems, feel free to open an issue.

PyPI

TrajAtlas is also available on PyPI:

pip install TrajAtlas

If you are working with osteogenesis scRNA datasets, you can install the extended version of TrajAtlas to project TrajAtlas onto your own datasets.

pip install TrajAtlas[scarches]

Development Version

To stay up-to-date with the newest version, run:

pip install git+https://github.com/GilbertHan1011/TrajAtlas.git@master